{
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  "Package": "virtualPollen",
  "Type": "Package",
  "Title": "Simulating Pollen Curves from Virtual Taxa with Different Life\nand Niche Traits",
  "Version": "1.0.2",
  "Authors@R": "person(given=\"Blas M.\", family=\"Benito\", email=\"blasbenito@gmail.com\", role=c(\"aut\", \"cre\"))",
  "Description": "Tools to generate virtual environmental drivers with a\ngiven temporal autocorrelation, and to simulate pollen curves\nat annual resolution over millennial time-scales based on these\ndrivers and virtual taxa with different life traits and niche\nfeatures. It also provides the means to simulate\nquasi-realistic pollen-data conditions by applying simulated\naccumulation rates and given depth intervals between\nconsecutive samples.",
  "License": "GPL (>= 2)",
  "URL": "https://github.com/BlasBenito/virtualPollen",
  "Encoding": "UTF-8",
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  "RoxygenNote": "7.3.2",
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  "Repository": "https://blasbenito.r-universe.dev",
  "Date/Publication": "2025-09-09 16:05:39 UTC",
  "RemoteUrl": "https://github.com/blasbenito/virtualpollen",
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  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-04 08:18:22 UTC",
    "User": "root"
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  "Author": "Blas M. Benito [aut, cre]",
  "Maintainer": "Blas M. Benito <blasbenito@gmail.com>",
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  "_created": "2026-10-04T08:18:22.000Z",
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      "date": "2022-02-13"
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    "aggregateSimulation",
    "compareSimulations",
    "fixParametersTypes",
    "parametersCheck",
    "parametersDataframe",
    "plotAcf",
    "plotSimulation",
    "rescaleVector",
    "simulateAccumulationRate",
    "simulateDriver",
    "simulateDriverS",
    "simulatePopulation",
    "toRegularTime"
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      "title": "Accumulation rate",
      "object": "accumulationRate",
      "class": [
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      ],
      "fields": [
        "time",
        "accumulation.rate",
        "grouping"
      ],
      "rows": 5000,
      "table": true,
      "tojson": true
    },
    {
      "name": "driverA",
      "title": "Driver A",
      "object": "driverA",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "driverB",
      "title": "Driver B",
      "object": "driverB",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "drivers",
      "title": "Drivers with different temporal autocorrelation.",
      "object": "drivers",
      "class": [
        "data.frame"
      ],
      "fields": [
        "time",
        "driver",
        "autocorrelation.length",
        "value"
      ],
      "rows": 20000,
      "table": true,
      "tojson": true
    },
    {
      "name": "parameters",
      "title": "Parameters of 4 virtual taxa.",
      "object": "parameters",
      "class": [
        "data.frame"
      ],
      "fields": [
        "label",
        "maximum.age",
        "reproductive.age",
        "fecundity",
        "growth.rate",
        "pollen.control",
        "maximum.biomass",
        "carrying.capacity",
        "driver.A.weight",
        "driver.B.weight",
        "niche.A.mean",
        "niche.A.sd",
        "niche.B.mean",
        "niche.B.sd",
        "autocorrelation.length.A",
        "autocorrelation.length.B"
      ],
      "rows": 4,
      "table": true,
      "tojson": true
    },
    {
      "name": "simulation",
      "title": "List with simulation outputs for all virtual taxa in 'parameters'.",
      "object": "simulation",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "accumulationRate",
      "title": "Accumulation rate",
      "topics": [
        "accumulationRate"
      ]
    },
    {
      "page": "acfToDf",
      "title": "Computes temporal autocorrelation in a vector, and returns a dataframe for easy plotting.",
      "topics": [
        "acfToDf"
      ]
    },
    {
      "page": "aggregateSimulation",
      "title": "Aggregates the output of 'simulatePopulation'.",
      "topics": [
        "aggregateSimulation"
      ]
    },
    {
      "page": "compareSimulations",
      "title": "Compares different simulations produced by 'simulatePopulation'.",
      "topics": [
        "compareSimulations"
      ]
    },
    {
      "page": "driverA",
      "title": "Driver A",
      "topics": [
        "driverA"
      ]
    },
    {
      "page": "driverB",
      "title": "Driver B",
      "topics": [
        "driverB"
      ]
    },
    {
      "page": "drivers",
      "title": "Drivers with different temporal autocorrelation.",
      "topics": [
        "drivers"
      ]
    },
    {
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      "title": "Fix data types in a parameters dataframe.",
      "topics": [
        "fixParametersTypes"
      ]
    },
    {
      "page": "parameters",
      "title": "Parameters of 4 virtual taxa.",
      "topics": [
        "parameters"
      ]
    },
    {
      "page": "parametersCheck",
      "title": "Plots main simulation parameters.",
      "topics": [
        "parametersCheck"
      ]
    },
    {
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      "title": "Generates a template dataframe to contain simulation parameters.",
      "topics": [
        "parametersDataframe"
      ]
    },
    {
      "page": "plotAcf",
      "title": "Plots results of 'acfToDf'.",
      "topics": [
        "plotAcf"
      ]
    },
    {
      "page": "plotSimulation",
      "title": "Plots results of 'simulatePopulation'.",
      "topics": [
        "plotSimulation"
      ]
    },
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      "page": "rescaleVector",
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      "topics": [
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      ]
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      "title": "Simulates a virtual sediment accumulation rate.",
      "topics": [
        "simulateAccumulationRate"
      ]
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      "topics": [
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      ]
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      "page": "simulateDriverS",
      "title": "Generates drivers for 'simulatePopulation'.",
      "topics": [
        "simulateDriverS"
      ]
    },
    {
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      "topics": [
        "simulatePopulation"
      ]
    },
    {
      "page": "simulation",
      "title": "List with simulation outputs for all virtual taxa in 'parameters'.",
      "topics": [
        "simulation"
      ]
    },
    {
      "page": "toRegularTime",
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